368 citations
- Brookhaven National LaboratoryUS6 papers
- University of British ColumbiaCA4 papers
- High Energy Accelerator Research OrganizationJP3 papers
- Kanazawa UniversityJP3 papers
- RIKEN BNL Research CenterUS3 papers
- The Graduate University for Advanced Studies, SOKENDAIJP3 papers
- University of SouthamptonGB3 papers
- Boston UniversityUS2 papers
- Center for Astrophysics Harvard & SmithsonianUS2 papers
- College of Staten IslandUS2 papers
- Columbia UniversityUS2 papers
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cs.DS2005
Exact and Approximation Algorithms for DNA Tag Set Design
Ion I. Mandoiu, Dragos Trinca
In this paper we propose new solution methods for designing tag sets for use in universal DNA arrays. First, we give integer linear programming formulations for two previous formal…
cs.DS2005
Improved Tag Set Design and Multiplexing Algorithms for Universal Arrays
Ion I. Mandoiu, Claudia Prajescu, Dragos Trinca
In this paper we address two optimization problems arising in the design of genomic assays based on universal tag arrays. First, we address the universal array tag set design probl…