output
20062026
most citedMapping the Human Body at Cellular Resolution -- The NIH Common Fund Human BioMolecular Atlas Program

690 citations

researchers with a paper here

Counting papers with at most 25 authors, so collaboration author lists do not stand in for the people here.

collaborating institutions
Showing physics.comp-phShow all

6 papers · 1 filter

physics.comp-ph2023★ 4 cited

Laser-induced alignment of nanoparticles and macromolecules for single-particle-imaging applications

Muhamed Amin, Jean-Michel Hartmann, Amit K. Samanta +1

Laser-induced alignment of particles and molecules was long envisioned to support three-dimensional structure determination using "single-molecule diffraction" with x-ray free-elec…

physics.comp-ph2022★ 56 cited

GraphVAMPNet, using graph neural networks and variational approach to markov processes for dynamical modeling of biomolecules

Mahdi Ghorbani, Samarjeet Prasad, Jeffery B. Klauda +1

Finding low dimensional representation of data from long-timescale trajectories of biomolecular processes such as protein-folding or ligand-receptor binding is of fundamental impor…

physics.comp-ph2021★ 42 cited

Human learning for molecular simulations: the Collective Variables Dashboard in VMD

Jérôme Hénin, Laura J. S. Lopes, Giacomo Fiorin

The Collective Variables Dashboard is a software tool for real-time, seamless exploration of molecular structures and trajectories in a customizable space of collective variables.…

physics.comp-ph2019★ 50 cited

Semi-Lagrangian lattice Boltzmann method for compressible flows

Dominik Wilde, Andreas Krämer, Dirk Reith +1

This work thoroughly investigates a semi-Lagrangian lattice Boltzmann (SLLBM) solver for compressible flows. In contrast to other LBM for compressible flows, the vertices are organ…

physics.comp-ph2019★ 16 cited

Comparison of Modern Langevin Integrators for Simulations of Coarse-Grained Polymer Melts

Joshua Finkelstein, Giacomo Fiorin, Benjamin Seibold

For a wide range of phenomena, current computational ability does not always allow for fully atomistic simulations of high-dimensional molecular systems to reach time scales of int…

physics.comp-ph2012★ 56 cited

Multiscale QM/MM Molecular Dynamics Study on the First Steps of Guanine-Damage by Free Hydroxyl Radicals in Solution

Ramin M. Abolfath, P. K. Biswas, R. Rajnarayanam +3

Understanding the damage of DNA bases from hydrogen abstraction by free OH radicals is of particular importance to reveal the effect of hydroxyl radicals produced by the secondary…