56 citations
Counting papers with at most 25 authors, so collaboration author lists do not stand in for the people here.
- University of TrentoIT9 papers
- University of CagliariIT3 papers
- University of EdinburghGB2 papers
- University of LeicesterGB2 papers
- Aalto UniversityFI1 paper
- Harvard UniversityUS1 paper
- Imperial College LondonGB1 paper
- Kyoto Sangyo UniversityJP1 paper
- Microsoft Research (United Kingdom)GB1 paper
- Microsoft (United States)US1 paper
- University of PisaIT1 paper
- University of TriesteIT1 paper
5 papers · 1 filter
BlenX-based compositional modeling of complex reaction mechanisms
Judit Zámborszky, Corrado Priami
Molecular interactions are wired in a fascinating way resulting in complex behavior of biological systems. Theoretical modeling provides a useful framework for understanding the dy…
Investigating modularity in the analysis of process algebra models of biochemical systems
Federica Ciocchetta, Maria Luisa Guerriero, Jane Hillston
Compositionality is a key feature of process algebras which is often cited as one of their advantages as a modelling technique. It is certainly true that in biochemical systems, as…
Flux Analysis in Process Models via Causality
Ozan Kahramanoğullari
We present an approach for flux analysis in process algebra models of biological systems. We perceive flux as the flow of resources in stochastic simulations. We resort to an estab…
Efficient Parallel Statistical Model Checking of Biochemical Networks
Paolo Ballarini, Michele Forlin, Tommaso Mazza +1
We consider the problem of verifying stochastic models of biochemical networks against behavioral properties expressed in temporal logic terms. Exact probabilistic verification app…
A compartmental model of the cAMP/PKA/MAPK pathway in Bio-PEPA
Federica Ciocchetta, Adam Duguid, Maria Luisa Guerriero
The vast majority of biochemical systems involve the exchange of information between different compartments, either in the form of transportation or via the intervention of membran…