output
19922020
most citedIn vivo anomalous diffusion and weak ergodicity breaking of lipid granules

662 citations

Showing 2011Show all

12 papers · 1 filter

astro-ph.EP2011★ 65 cited

Shape modeling technique KOALA validated by ESA Rosetta at (21) Lutetia

B. Carry, M. Kaasalainen, W. J. Merline +12

We present a comparison of our results from ground-based observations of asteroid (21) Lutetia with imaging data acquired during the flyby of the asteroid by the ESA Rosetta missio…

cond-mat.str-el2011★ 6 cited

Large two-dimensional electronic systems: Self-consistent energies and densities at low cost

E. Rasanen, S. Pittalis, G. Bekcioglu +1

We derive a self-consistent local variant of the Thomas-Fermi approximation for (quasi-)two-dimensional (2D) systems by localizing the Hartree term. The scheme results in an explic…

physics.comp-ph2011★ 13 cited

An Algorithm for the Stochastic Simulation of Gene Expression and Heterogeneous Population Dynamics

Daniel A. Charlebois, Jukka Intosalmi, Dawn Fraser +1

We present an algorithm for the stochastic simulation of gene expression and heterogeneous population dynamics. The algorithm combines an exact method to simulate molecular-level f…

q-bio.BM2011★ 25 cited

Determining the DNA stability parameters for the breathing dynamics of heterogeneous DNA by stochastic optimization

Srijeeta Talukder, Pinaki Chaudhury, Ralf Metzler +1

We suggest that the thermodynamic stability parameters (nearest neighbor stacking and hydrogen bonding free energies) of double-stranded DNA molecules can be inferred reliably from…

math.CO2011★ 3 cited

Antichain cutsets of strongly connected posets

Stephan Foldes, Russ Woodroofe

Rival and Zaguia showed that the antichain cutsets of a finite Boolean lattice are exactly the level sets. We show that a similar characterization of antichain cutsets holds for an…

math.OC2011★ 613 cited

BM3D Frames and Variational Image Deblurring

Aram Danielyan, Vladimir Katkovnik, Karen Egiazarian

A family of the Block Matching 3-D (BM3D) algorithms for various imaging problems has been recently proposed within the framework of nonlocal patch-wise image modeling [1], [2]. In…

cond-mat.supr-con2011★ 33 cited

Spectral decomposition and matrix element effects in scanning tunneling spectroscopy of BiSrCaCuO

Jouko Nieminen, Ilpo Suominen, R. S. Markiewicz +2

We present a Green's function based framework for modeling the scanning tunneling spectrum from the normal as well as the superconducting state of complex materials where the natur…

cond-mat.supr-con2011★ 8 cited

Effect of orbital symmetry of the tip on Scanning Tunneling Spectra of BiSrCaCuO

Ilpo Suominen, Jouko Nieminen, R. S. Markiewicz +1

We discuss how variations in the scanning tunneling microscope (STM) tip, whether unintentional or intentional, can lead to changes in topographic images and dI/dV spectra. We cons…

cond-mat.stat-mech2011★ 12 cited

Residual mean first-passage time for jump processes: theory and applications to Lévy flights and fractional Brownian motion

Vincent Tejedor, Olivier Bénichou, Ralf Metzler +1

We derive a functional equation for the mean first-passage time (MFPT) of a generic self-similar Markovian continuous process to a target in a one-dimensional domain and obtain its…

cond-mat.soft2011★ 40 cited

The chain sucker: translocation dynamics of a polymer chain into a long narrow channel driven by longitudinal flow

Kaifu Luo, Ralf Metzler

Using analytical techniques and Langevin dynamics simulations, we investigate the dynamics of polymer translocation into a narrow channel of width embedded in two dimensions, d…

cond-mat.stat-mech2011★ 43 cited

First passage behaviour of fractional Brownian motion in two-dimensional wedge domains

J. -H. Jeon, A. V. Chechkin, R. Metzler

We study the survival probability and the corresponding first passage time density of fractional Brownian motion confined to a two-dimensional open wedge domain with absorbing boun…

cond-mat.stat-mech2011★ 28 cited

Effective surface motion on a reactive cylinder of particles that perform intermittent bulk diffusion

Aleksei V. Chechkin, Irwin M. Zaid, Michael A. Lomholt +2

In many biological and small scale technological applications particles may transiently bind to a cylindrical surface. In between two binding events the particles diffuse in the bu…