122 citations
- Centre National de la Recherche ScientifiqueFR10 papers
- Laboratoire de Physique Théorique de la Matière CondenséeFR6 papers
- Sorbonne UniversitéFR6 papers
- Université de MontpellierFR6 papers
- InsermFR4 papers
- Génétique et biologie du développementFR2 papers
- Institut CurieFR2 papers
- Structure et Instabilité des GénomesFR2 papers
- Université Pierre-et-Marie-CurieFR2 papers
- Adaptation Biologique et VieillissementFR1 paper
- BioCampus MontpellierFR1 paper
- Biologie du Développement et Cellules SouchesFR1 paper
10 papers
F-BIAS: Towards a distributed national core facility for Bioimage Analysis
Mélodie Ambroset, Marie Anselmet, Clément Benedetti +18
We discuss in this article the creation and organization of a national core facility for bioimage analysis, based on a distributed team. F-BIAS federates bioimage analysts across F…
Radius selection using kernel density estimation for the computation of nonlinear measures
Johan Medrano, Abderrahmane Kheddar, Annick Lesne +1
When nonlinear measures are estimated from sampled temporal signals with finite-length, a radius parameter must be carefully selected to avoid a poor estimation. These measures are…
Predicting attractors from spectral properties of stylized gene regulatory networks
Dzmitry Rumiantsau, Annick Lesne, Marc-Thorsten Hütt
How the architecture of gene regulatory networks ultimately shapes gene expression patterns is an open question, which has been approached from a multitude of angles. The dominant…
The 3D genome shapes the regulatory code of developmental genes
Julien Mozziconacci, Mélody Merle, Annick Lesne
We revisit the notion of gene regulatory code in embryonic development in the light of recent findings about genome spatial organisation. By analogy with the genetic code, we posit…
Imprinting control regions (ICRs) are marked by mono-allelic bivalent chromatin when transcriptionally inactive
Stéphanie Maupetit-Méhouas, Bertille Montibus, David Nury +11
Parental allele-specific expression of imprinted genes is mediated by imprinting control regions (ICRs) that are constitutively marked by DNA methylation imprints on the maternal o…
Kinetic signature of cooperativity in the irreversible collapse of a polymer
Vittore F. Scolari, Guillaume Mercy, Romain Koszul +2
We investigate the kinetics of a polymer collapse due to the formation of irreversible crosslinks between its monomers. Using the contact probability as a scale-dependent or…