output
20122024
most citedQUAREP-LiMi: A community-driven initiative to establish guidelines for quality assessment and reproducibility for instruments and images in light microscopy

63 citations

11 papers

q-bio.OT2024

F-BIAS: Towards a distributed national core facility for Bioimage Analysis

Mélodie Ambroset, Marie Anselmet, Clément Benedetti +18

We discuss in this article the creation and organization of a national core facility for bioimage analysis, based on a distributed team. F-BIAS federates bioimage analysts across F…

q-bio.OT2021★ 63 cited

QUAREP-LiMi: A community-driven initiative to establish guidelines for quality assessment and reproducibility for instruments and images in light microscopy

Glyn Nelson, Ulrike Boehm, Steve Bagley +97

In April 2020, the QUality Assessment and REProducibility for Instruments and Images in Light Microscopy (QUAREP-LiMi) initiative was formed. This initiative comprises imaging scie…

q-bio.CB2019

Stay hydrated: Basolateral fluids shaping tissues

Markus Schliffka, Jean-Léon Maître

During development, embryos perform a mesmerizing choreography, which is crucial for the correct shaping, positioning and function of all organs. The cellular properties powering a…

q-bio.TO2018

Collective stresses drive competition between monolayers of normal and Ras-transformed cells

Sarah Moitrier, Carles Blanch-Mercader, Simon Garcia +6

We study the competition for space between two cell lines that differ only in the expression of the Ras oncogene. The two cell populations are initially separated and set to migrat…

q-bio.NC2018

State-Dependent Modulation of Locomotion by GABAergic Spinal Sensory Neurons

Kevin Fidelin, Lydia Djenoune, Caleb Stokes +5

The cerebrospinal fluid (CSF) constitutes an interface through which chemical cues can reach and modulate the activity of neurons located at the epithelial boundary within the enti…

q-bio.GN2018★ 51 cited

Imprinting control regions (ICRs) are marked by mono-allelic bivalent chromatin when transcriptionally inactive

Stéphanie Maupetit-Méhouas, Bertille Montibus, David Nury +11

Parental allele-specific expression of imprinted genes is mediated by imprinting control regions (ICRs) that are constitutively marked by DNA methylation imprints on the maternal o…

q-bio.TO2018★ 27 cited

Fast determination of coarse grained cell anisotropy and size in epithelial tissue images using Fourier transform

M. Durande, S. Tlili, T. Homan +3

Mechanical strain and stress play a major role in biological processes such as wound healing or morphogenesis. To assess this role quantitatively, fixed or live images of tissues a…

astro-ph.EP2018

Computing Apparent Planetary Magnitudes for The Astronomical Almanac

Anthony Mallama, James L. Hilton

Improved equations for computing planetary magnitudes are reported. These formulas model V-band observations acquired from the time of the earliest filter photometry in the 1950s u…

q-bio.TO2014★ 10 cited

Robustness of force and stress inference in an epithelial tissue

K. Sugimura, Y. Bellaïche, F. Graner +2

During morphogenesis, the shape of a tissue emerges from collective cellular behaviors, which are in part regulated by mechanical and biochemical interactions between cells. Quanti…

q-bio.QM2013★ 1 cited

Comparative study of non-invasive force and stress inference methods in tissue

S. Ishihara, K. Sugimura, S. J. Cox +3

In the course of animal development, the shape of tissue emerges in part from mechanical and biochemical interactions between cells. Measuring stress in tissue is essential for stu…

q-bio.CB2012★ 3 cited

Mechanical state, material properties and continuous description of an epithelial tissue

Isabelle Bonnet, Philippe Marcq, Floris Bosveld +3

During development, epithelial tissues undergo extensive morphogenesis based on coordinated changes of cell shape and position over time. Continuum mechanics describes tissue mecha…