87 citations
- Universidade do PortoPT4 papers
- École Polytechnique Fédérale de LausanneCH2 papers
- INESC TECPT2 papers
- Institute for Systems Engineering and ComputersPT2 papers
- Allen Institute for Cell ScienceUS1 paper
- Ames Research CenterUS1 paper
- Baker Heart and Diabetes InstituteAU1 paper
- Broad InstituteUS1 paper
- Carl Zeiss (Germany)DE1 paper
- Centre for Genomic RegulationES1 paper
- Centre for Human Drug ResearchNL1 paper
- Centre National de la Recherche ScientifiqueFR1 paper
6 papers
MigraR: an open-source, R-based application for analysis and quantification of cell migration parameters
Nirbhaya Shajia, Florbela Nunes, M. Ines Rocha +2
Background and objective: Cell migration is essential for many biological phenomena with direct impact on human health and disease. One conventional approach to study cell migratio…
Community-developed checklists for publishing images and image analysis
Christopher Schmied, Michael Nelson, Sergiy Avilov +51
Images document scientific discoveries and are prevalent in modern biomedical research. Microscopy imaging in particular is currently undergoing rapid technological advancements. H…
Quantization for decentralized learning under subspace constraints
Roula Nassif, Stefan Vlaski, Marco Carpentiero +3
In this paper, we consider decentralized optimization problems where agents have individual cost functions to minimize subject to subspace constraints that require the minimizers a…
HEROHE Challenge: assessing HER2 status in breast cancer without immunohistochemistry or in situ hybridization
Eduardo Conde-Sousa, João Vale, Ming Feng +15
Breast cancer is the most common malignancy in women, being responsible for more than half a million deaths every year. As such, early and accurate diagnosis is of paramount import…
Modeling chronic pain experiences from online reports using the Reddit Reports of Chronic Pain dataset
Diogo A. P. Nunes, Joana Ferreira-Gomes, Fani Neto +1
Objective: Reveal and quantify qualities of reported experiences of chronic pain on social media, from multiple pathological backgrounds, by means of the novel Reddit Reports of Ch…
Whole slide image registration for the study of tumor heterogeneity
Leslie Solorzano, Gabriela M. Almeida, Bárbara Mesquita +3
Consecutive thin sections of tissue samples make it possible to study local variation in e.g. protein expression and tumor heterogeneity by staining for a new protein in each secti…