output
20132025
most citedBeyond the exome: what's next in diagnostic testing for Mendelian conditions

130 citations

27 papers

q-bio.QM2025

Foundation Models in Biomedical Imaging: Turning Hype into Reality

Amgad Muneer, Kai Zhang, Ibraheem Hamdi +6

Foundation models (FMs) are driving a prominent shift in biomedical imaging from task-specific models to unified backbone models for diverse tasks. This opens an avenue to integrat…

cs.CV2025★ 1 cited

Improving Pre-trained Adult Glioma Segmentation Models Using only Post-processing Techniques

Abhijeet Parida, Daniel Capellán-Martín, Zhifan Jiang +6

Gliomas are the most common malignant brain tumors in adults and are among the most lethal. Despite aggressive treatment, the median survival rate is less than 15 months. Accurate…

cs.CV2025

Adaptable Segmentation Pipeline for Diverse Brain Tumors with Radiomic-Guided Subtyping and Lesion-Wise Model Ensemble

Daniel Capellán-Martín, Abhijeet Parida, Zhifan Jiang +6

Robust and generalizable segmentation of brain tumors on multi-parametric magnetic resonance imaging (MRI) remains difficult because tumor types differ widely. The BraTS 2025 Light…

eess.IV2024★ 12 cited

Model Ensemble for Brain Tumor Segmentation in Magnetic Resonance Imaging

Daniel Capellán-Martín, Zhifan Jiang, Abhijeet Parida +8

Segmenting brain tumors in multi-parametric magnetic resonance imaging enables performing quantitative analysis in support of clinical trials and personalized patient care. This an…

cs.CL2024★ 1 cited

mhGPT: A Lightweight Generative Pre-Trained Transformer for Mental Health Text Analysis

Dae-young Kim, Rebecca Hwa, Muhammad Mahbubur Rahman

This paper introduces mhGPT, a lightweight generative pre-trained transformer trained on mental health-related social media and PubMed articles. Fine-tuned for specific mental heal…

cs.CV2024

Data Alchemy: Mitigating Cross-Site Model Variability Through Test Time Data Calibration

Abhijeet Parida, Antonia Alomar, Zhifan Jiang +7

Deploying deep learning-based imaging tools across various clinical sites poses significant challenges due to inherent domain shifts and regulatory hurdles associated with site-spe…