14.3k citations
- Broad InstituteUS1 paper
- Complete Genomics (United States)US1 paper
- Icahn School of Medicine at Mount SinaiUS1 paper
- Imperial College LondonGB1 paper
- Institute of MicrobiologyCN1 paper
- Massachusetts General HospitalUS1 paper
- National Institutes of HealthUS1 paper
- Swansea UniversityGB1 paper
- Twin Cities OrthopedicsUS1 paper
- University of CopenhagenDK1 paper
- University of MinnesotaUS1 paper
2 papers
q-bio.GN2014★ 14.3k cited
Second-generation PLINK: rising to the challenge of larger and richer datasets
Christopher C. Chang, Carson C. Chow, Laurent C. A. M. Tellier +3
PLINK 1 is a widely used open-source C/C++ toolset for genome-wide association studies (GWAS) and research in population genetics. However, the steady accumulation of data from imp…
q-bio.PE2014
Epidemic clones, oceanic gene pools and eco-LD in the free living marine pathogen Vibrio parahaemolyticus
Yujun Cui, Xianwei Yang, Xavier Didelot +12
We investigated global patterns of variation in 157 whole genome sequences of Vibrio parahaemolyticus, a free-living and seafood associated marine bacterium. Pandemic clones, respo…