output
20092025
most citedAssemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species

742 citations

27 papers

q-bio.OT2025★ 2 cited

Mathematical and Computational Nuclear Oncology: Toward Optimized Radiopharmaceutical Therapy via Digital Twins

Marc Ryhiner, Yangmeihui Song, Babak Saboury +3

This article presents the general framework of theranostic digital twins (TDTs) in computational nuclear medicine, designed to support clinical decision-making and improve cancer p…

physics.med-ph2025

Predictive Dosimetry in PSMA-Targeted Radiopharmaceutical Therapies: A PBPK Modeling and Machine Learning Study

Hamid Abdollahi, James Fowler, Carlos Uribe +1

Predictive dosimetry is central to enabling personalized radiopharmaceutical therapy (RPT), particularly in prostate specific membrane antigen (PSMA) targeted theranostics. In this…

eess.IV2024★ 1 cited

IgCONDA-PET: Weakly-Supervised PET Anomaly Detection using Implicitly-Guided Attention-Conditional Counterfactual Diffusion Modeling -- a Multi-Center, Multi-Cancer, and Multi-Tracer Study

Shadab Ahamed, Arman Rahmim

Minimizing the need for pixel-level annotated data to train PET lesion detection and segmentation networks is highly desired and can be transformative, given time and cost constrai…

physics.med-ph2024★ 4 cited

Investigating heterogeneous PSMA ligand uptake inside parotid glands

Caleb Sample, Carlos Uribe, Arman Rahmim +3

The purpose was to investigate the spatial heterogeneity of prostate-specific membrane antigen (PSMA) positron emission tomography (PET) uptake within parotid glands. We aim to qua…

physics.med-ph2023★ 6 cited

PSMA PET/CT as a predictive tool for sub-regional importance estimates in the parotid gland

Caleb Sample, Arman Rahmim, François Bénard +2

Xerostomia and radiation-induced salivary gland dysfunction remain a common side effect for head-and-neck radiotherapy patients, and attempts have been made to quantify the heterog…

physics.med-ph2023★ 8 cited

Neural blind deconvolution for deblurring and supersampling PSMA PET

Caleb Sample, Arman Rahmim, Carlos Uribe +4

Objective: To simultaneously deblur and supersample prostate specific membrane antigen (PSMA) positron emission tomography (PET) images using neural blind deconvolution. Approach:…