output
20102026
most citedDirect-coupling analysis of residue co-evolution captures native contacts across many protein families

1.6k citations

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5 papers · 1 filter

q-bio.PE2023★ 5 cited

Effectiveness of probabilistic contact tracing in epidemic containment: the role of super-spreaders and transmission path reconstruction

A. P. Muntoni, F. Mazza, A. Braunstein +2

The recent COVID-19 pandemic underscores the significance of early-stage non-pharmacological intervention strategies. The widespread use of masks and the systematic implementation…

q-bio.PE2021★ 7 cited

Path-integral solution of MacArthur's resource-competition model for large ecosystems with random species-resources couplings

A. R. Batista-Tomas, Andrea De Martino, Roberto Mulet

We solve MacArthur's resource-competition model with random species-resource couplings in the `thermodynamic' limit of infinitely many species and resources using dynamical path-in…

q-bio.PE2020★ 31 cited

Epidemic mitigation by statistical inference from contact tracing data

Antoine Baker, Indaco Biazzo, Alfredo Braunstein +10

Contact-tracing is an essential tool in order to mitigate the impact of pandemic such as the COVID-19. In order to achieve efficient and scalable contact-tracing in real time, digi…

q-bio.PE2018★ 22 cited

Exploration-exploitation tradeoffs dictate the optimal distributions of phenotypes for populations subject to fitness fluctuations

Andrea De Martino, Thomas Gueudré, Mattia Miotto

We study a minimal model for the growth of a phenotypically heterogeneous population of cells subject to a fluctuating environment in which they can replicate (by exploiting availa…

q-bio.PE2014★ 32 cited

The zero-patient problem with noisy observations

Fabrizio Altarelli, Alfredo Braunstein, Luca Dall'Asta +2

A Belief Propagation approach has been recently proposed for the zero-patient problem in a SIR epidemics. The zero-patient problem consists in finding the initial source of an epid…