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4 papers · 1 filter
Transcriptome-supervised classification of tissue morphology using deep learning
Axel Andersson, Gabriele Partel, Leslie Solorzano +1
Deep learning has proven to successfully learn variations in tissue and cell morphology. Training of such models typically relies on expensive manual annotations. Here we conjectur…
Pycro-manager: open-source software for integrated microscopy hardware control and image processing
Henry Pinkard, Nico Stuurman, Laura Waller
μManager, an open-source microscopy acquisition software, has been an essential tool for many microscopy experiments over the past 15 years, but is not easy to use for experiments…
Adaptive ensemble simulations of biomolecules
Peter M. Kasson, Shantenu Jha
Recent advances in both theory and computational power have created opportunities to simulate biomolecular processes more efficiently using adaptive ensemble simulations. Ensemble…
Fluctuations in growth rates determine the generation time and size distributions of E. coli cells
Mats Wallden, David Fange, Özden Baltekin +1
Isogenic Escherichia coli growing exponentially in a constant environment display large variation in growth-rates, division-sizes and generation-times. It is unclear how these seem…