output
20052024
most citedVerification of the Crooks fluctuation theorem and recovery of RNA folding free energies

1.1k citations

Showing 2020Show all

10 papers · 1 filter

stat.ML2020★ 69 cited

Olympus: a benchmarking framework for noisy optimization and experiment planning

Florian Häse, Matteo Aldeghi, Riley J. Hickman +5

Research challenges encountered across science, engineering, and economics can frequently be formulated as optimization tasks. In chemistry and materials science, recent growth in…

stat.AP2020★ 68 cited

Principal Stratum Strategy: Potential Role in Drug Development

Björn Bornkamp, Kaspar Rufibach, Jianchang Lin +6

A randomized trial allows estimation of the causal effect of an intervention compared to a control in the overall population and in subpopulations defined by baseline characteristi…

q-bio.OT2020★ 36 cited

Assessing the Impact of COVID-19 on the Objective and Analysis of Oncology Clinical Trials -- Application of the Estimand Framework

Evgeny Degtyarev, Kaspar Rufibach, Yue Shentu +10

COVID-19 outbreak has rapidly evolved into a global pandemic. The impact of COVID-19 on patient journeys in oncology represents a new risk to interpretation of trial results and it…

q-bio.OT2020

Clinical Trial Drug Safety Assessment for Studies and Submissions Impacted by COVID-19

Mary Nilsson, Brenda Crowe, Greg Anglin +4

In this paper, we provide guidance on how standard safety analyses and reporting of clinical trial safety data may need to be modified, given the potential impact of the COVID-19 p…

stat.AP2020

Decision Making in Drug Development via Inference on Power

Geoffrey S Johnson

A typical power calculation is performed by replacing unknown population-level quantities in the power function with what is observed in external studies. Many authors and practiti…

cs.CV2020★ 8 cited

Group Equivariant Generative Adversarial Networks

Neel Dey, Antong Chen, Soheil Ghafurian

Recent improvements in generative adversarial visual synthesis incorporate real and fake image transformation in a self-supervised setting, leading to increased stability and perce…

stat.ME2020★ 8 cited

An efficient and accurate approximation to the distribution of quadratic forms of Gaussian variables

Hong Zhang, Judong Shen, Zheyang Wu

In computational and applied statistics, it is of great interest to get fast and accurate calculation for the distributions of the quadratic forms of Gaussian random variables. Thi…

stat.ME2020★ 1 cited

Multiplicity for a Group Sequential Trial with Biomarker Subpopulations

Ting-Yu Chen, Jing Zhao, Linda Sun +1

Biomarker subpopulations have become increasingly important for drug development in targeted therapies. The use of biomarkers has the potential to facilitate more effective outcome…

eess.IV2020

A deep learning-facilitated radiomics solution for the prediction of lung lesion shrinkage in non-small cell lung cancer trials

Antong Chen, Jennifer Saouaf, Bo Zhou +6

Herein we propose a deep learning-based approach for the prediction of lung lesion response based on radiomic features extracted from clinical CT scans of patients in non-small cel…

stat.ME2020★ 15 cited

The Reciprocal Bayesian LASSO

Himel Mallick, Rahim Alhamzawi, Erina Paul +1

A reciprocal LASSO (rLASSO) regularization employs a decreasing penalty function as opposed to conventional penalization approaches that use increasing penalties on the coefficient…