466 citations · 553 across the 25 of their papers we have counts for
3 papers · 1 filter
Identifying the Rooted Species Tree from the Distribution of Unrooted Gene Trees under the Coalescent
Elizabeth S. Allman, James H. Degnan, John A. Rhodes
Gene trees are evolutionary trees representing the ancestry of genes sampled from multiple populations. Species trees represent populations of individuals -- each with many genes -…
Identifiability of 2-tree mixtures for group-based models
Elizabeth S. Allman, Sonja Petrović, John A. Rhodes +1
Phylogenetic data arising on two possibly different tree topologies might be mixed through several biological mechanisms, including incomplete lineage sorting or horizontal gene tr…
Estimating Trees from Filtered Data: Identifiability of Models for Morphological Phylogenetics
Elizabeth S. Allman, Mark T. Holder, John A. Rhodes
As an alternative to parsimony analyses, stochastic models have been proposed (Lewis, 2001), (Nylander, et al., 2004) for morphological characters, so that maximum likelihood or Ba…