57 citations · 110 across the 40 of their papers we have counts for
5 papers · 1 filter
Deciding the existence of a cherry-picking sequence is hard on two trees
Janosch Döcker, Leo van Iersel, Steven Kelk +1
Here we show that deciding whether two rooted binary phylogenetic trees on the same set of taxa permit a cherry-picking sequence, a special type of elimination order on the taxa, i…
Exploring the tiers of rooted phylogenetic network space using tail moves
Remie Janssen, Mark Jones, Péter L. Erdős +2
Popular methods for exploring the space of rooted phylogenetic trees use rearrangement moves such as rNNI (rooted Nearest Neighbour Interchange) and rSPR (rooted Subtree Prune and…
Finding the most parsimonious or likely tree in a network with respect to an alignment
Steven Kelk, Fabio Pardi, Celine Scornavacca +1
Phylogenetic networks are often constructed by merging multiple conflicting phylogenetic signals into a directed acyclic graph. It is interesting to explore whether a network const…
Binets: fundamental building blocks for phylogenetic networks
Leo van Iersel, Vincent Moulton, Eveline de Swart +1
Phylogenetic networks are a generalization of evolutionary trees that are used by biologists to represent the evolution of organisms which have undergone reticulate evolution. Esse…
Leaf-reconstructibility of phylogenetic networks
Leo van Iersel, Vincent Moulton
An important problem in evolutionary biology is to reconstruct the evolutionary history of a set of species. This history is often represented as a phylogenetic network, that i…