57 citations · 110 across the 40 of their papers we have counts for
22 papers · 1 filter
Encoding level-3 semi-directed phylogenetic networks by quarnets and quinnets
Niels Holtgrefe, Katharina T. Huber, Leo van Iersel +1
Phylogenetic networks generalize phylogenetic trees as models of evolutionary history, allowing lineages to merge as well as to diverge. For many types of genetic data the root pos…
On Tree-Network Distinguishability and Full Identifiability of Phylogenetic Networks
Jari Brits, Niels Holtgrefe, Leo van Iersel +1
Phylogenetic networks generalize phylogenetic trees to evolutionary histories that include reticulate events such as recombination, horizontal gene transfer, and hybridization. Und…
When are quarnets sufficient to reconstruct semi-directed phylogenetic networks?
Katharina T. Huber, Leo van Iersel, Mark Jones +2
Phylogenetic networks are graphs that are used to represent evolutionary relationships between different taxa. They generalize phylogenetic trees since for example, unlike trees, t…
Invariants for level-1 phylogenetic networks under the random walk 4-state Markov model
M. Frohn, N. Holtgrefe, L. van Iersel +2
Phylogenetic networks can represent evolutionary events that cannot be described by phylogenetic trees, such as hybridization, introgression, and lateral gene transfer. Studying ph…
Fence decompositions and cherry covers in non-binary phylogenetic networks
Joan Carles Pons, Pau Vives López, Yukihiro Murakami +1
Reticulate evolution can be modelled using phylogenetic networks. Tree-based networks, which are one of the more general classes of phylogenetic networks, have recently gained emin…
Solving the Tree Containment Problem Using Graph Neural Networks
Arkadiy Dushatskiy, Esther Julien, Leen Stougie +1
Tree Containment is a fundamental problem in phylogenetics useful for verifying a proposed phylogenetic network, representing the evolutionary history of certain species. Tree Cont…