9 citations · 29 across the 15 of their papers we have counts for
Showing 2016Show all
3 papers · 1 filter
q-bio.PE2016★ 1 cited
Phylogenetic trees
Hector Baños, Nathaniel Bushek, Ruth Davidson +6
We introduce the package PhylogeneticTrees for Macaulay2 which allows users to compute phylogenetic invariants for group-based tree models. We provide some background information o…
math.AG2016
Initial Ideals of Pfaffian Ideals
Colby Long
We resolve a conjecture about a class of binomial initial ideals of , the ideal of the Grassmannian, Gr), which are associated to phylogenetic trees. For…
math.CO2016
L-Infinity optimization in tropical geometry and phylogenetics
Daniel Irving Bernstein, Colby Long
We investigate uniqueness issues that arise in -optimization to linear spaces and Bergman fans of matroids. For linear spaces, we give a polyhedral decomposition of $\mat…