activity
20172025
most citedParticle Filters for Partially-Observed Boolean Dynamical Systems

115 citations · 136 across the 7 of their papers we have counts for

collaborators

7 papers

cs.LG2025

A State-Space Approach to Nonstationary Discriminant Analysis

Shuilian Xie, Mahdi Imani, Edward R. Dougherty +1

Classical discriminant analysis assumes identically distributed training data, yet in many applications observations are collected over time and the class-conditional distributions…

math.OC2022★ 1 cited

A Bayesian Optimization Framework for Finding Local Optima in Expensive Multi-Modal Functions

Yongsheng Mei, Tian Lan, Mahdi Imani +1

Bayesian optimization (BO) is a popular global optimization scheme for sample-efficient optimization in domains with expensive function evaluations. The existing BO techniques are…

q-bio.MN2022★ 19 cited

Inference of Regulatory Networks Through Temporally Sparse Data

Mohammad Alali, Mahdi Imani

A major goal in genomics is to properly capture the complex dynamical behaviors of gene regulatory networks (GRNs). This includes inferring the complex interactions between genes,…

q-bio.GN2019

Scalable optimal Bayesian classification of single-cell trajectories under regulatory model uncertainty

Ehsan Hajiramezanali, Mahdi Imani, Ulisses Braga-Neto +2

Single-cell gene expression measurements offer opportunities in deriving mechanistic understanding of complex diseases, including cancer. However, due to the complex regulatory mac…

q-bio.MN2018

Sequential Experimental Design for Optimal Structural Intervention in Gene Regulatory Networks Based on the Mean Objective Cost of Uncertainty

Mahdi Imani, Roozbeh Dehghannasiri, Ulisses M. Braga-Neto +1

Scientists are attempting to use models of ever increasing complexity, especially in medicine, where gene-based diseases such as cancer require better modeling of cell regulation.…

q-bio.MN2017★ 1 cited

Control of Gene Regulatory Networks with Noisy Measurements and Uncertain Inputs

Mahdi Imani, Ulisses Braga-Neto

This paper is concerned with the problem of stochastic control of gene regulatory networks (GRNs) observed indirectly through noisy measurements and with uncertainty in the interve…

stat.ME2017★ 115 cited

Particle Filters for Partially-Observed Boolean Dynamical Systems

Mahdi Imani, Ulisses Braga-Neto

Partially-observed Boolean dynamical systems (POBDS) are a general class of nonlinear models with application in estimation and control of Boolean processes based on noisy and inco…