742 citations · 759 across the 3 of their papers we have counts for
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q-bio.GN2017★ 6 cited
Meraculous-2D: Haplotype-sensitive Assembly of Highly Heterozygous genomes
Eugene Goltsman, Isaac Ho, Daniel Rokhsar
While many short read assemblers attempt to simplify the de Brujin graph by identifying and resolving variant-induced bubbles to produce a haploid mosaic result, this approach is o…
q-bio.GN2013★ 742 cited
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
Keith R. Bradnam, Joseph N. Fass, Anton Alexandrov +88
Background - The process of generating raw genome sequence data continues to become cheaper, faster, and more accurate. However, assembly of such data into high-quality, finished g…