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19942024
most citedStructural, mechanical and thermodynamic properties of a coarse-grained DNA model

498 citations · 7.6k across the 97 of their papers we have counts for

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Showing 2010Show all

8 papers · 1 filter

cond-mat.soft2010★ 49 cited

Templated self-assembly of patchy particles

Alexander J. Williamson, Alex W. Wilber, Jonathan P. K. Doye +1

We explore the use of templated self-assembly to facilitate the formation of complex target structures made from patchy particles. First, we consider the templating of high-symmetr…

cond-mat.soft2010★ 37 cited

Reentrant phase behaviour for systems with competition between phase separation and self-assembly

Aleks Reinhardt, Alexander J. Williamson, Jonathan P. K. Doye +3

In patchy particle systems where there is competition between the self-assembly of finite clusters and liquid-vapour phase separation, reentrant phase behaviour is observed, with t…

q-bio.BM2010★ 498 cited

Structural, mechanical and thermodynamic properties of a coarse-grained DNA model

Thomas E. Ouldridge, Ard A. Louis, Jonathan P. K. Doye

We explore in detail the structural, mechanical and thermodynamic properties of a coarse-grained model of DNA similar to that introduced in Thomas E. Ouldridge, Ard A. Louis, Jonat…

cond-mat.mtrl-sci2010★ 108 cited

The stability of a crystal with diamond structure for patchy particles with tetrahedral symmetry

Eva G. Noya, Carlos Vega, Jonathan P. K. Doye +1

The phase diagram of model anisotropic particles with four attractive patches in a tetrahedral arrangement has been computed at two different values for the range of the potential,…

q-bio.PE2010★ 44 cited

The effect of scale-free topology on the robustness and evolvability of genetic regulatory networks

Sam F. Greenbury, Iain G. Johnston, Matthew A. Smith +2

We investigate how scale-free (SF) and Erdos-Renyi (ER) topologies affect the interplay between evolvability and robustness of model gene regulatory networks with Boolean threshold…

cond-mat.stat-mech2010★ 71 cited

Self-assembly, modularity and physical complexity

S. E. Ahnert, I. G. Johnston, T. M. A. Fink +2

We present a quantitative measure of physical complexity, based on the amount of information required to build a given physical structure through self-assembly. Our procedure can b…