42 citations · 87 across the 4 of their papers we have counts for
3 papers · 1 filter
Estimation and uncertainty of reversible Markov models
Benjamin Trendelkamp-Schroer, Hao Wu, Fabian Paul +1
Reversibility is a key concept in Markov models and Master-equation models of molecular kinetics. The analysis and interpretation of the transition matrix encoding the kinetic prop…
Efficient estimation of rare-event kinetics
Benjamin Trendelkamp-Schroer, Frank Noe
The efficient calculation of rare-event kinetics in complex dynamical systems, such as the rate and pathways of ligand dissociation from a protein, is a generally unsolved problem.…
Efficient Bayesian estimation of Markov model transition matrices with given stationary distribution
Benjamin Trendelkamp-Schroer, Frank Noe
Direct simulation of biomolecular dynamics in thermal equilibrium is challenging due to the metastable nature of conformation dynamics and the computational cost of molecular dynam…