42 citations · 87 across the 4 of their papers we have counts for
5 papers
Reversible Markov chain estimation using convex-concave programming
Benjamin Trendelkamp-Schroer, Hao Wu, Frank Noe
We present a convex-concave reformulation of the reversible Markov chain estimation problem and outline an efficient numerical scheme for the solution of the resulting problem base…
Estimation and uncertainty of reversible Markov models
Benjamin Trendelkamp-Schroer, Hao Wu, Fabian Paul +1
Reversibility is a key concept in Markov models and Master-equation models of molecular kinetics. The analysis and interpretation of the transition matrix encoding the kinetic prop…
Efficient estimation of rare-event kinetics
Benjamin Trendelkamp-Schroer, Frank Noe
The efficient calculation of rare-event kinetics in complex dynamical systems, such as the rate and pathways of ligand dissociation from a protein, is a generally unsolved problem.…
Efficient Bayesian estimation of Markov model transition matrices with given stationary distribution
Benjamin Trendelkamp-Schroer, Frank Noe
Direct simulation of biomolecular dynamics in thermal equilibrium is challenging due to the metastable nature of conformation dynamics and the computational cost of molecular dynam…
Environment-Assisted Error Correction of Single-Qubit Phase Damping
Benjamin Trendelkamp-Schroer, Julius Helm, Walter T. Strunz
Open quantum system dynamics of random unitary type may in principle be fully undone. Closely following the scheme of environment-assisted error correction proposed by Gregoratti a…