activity
20162023
most citedEnhancing Clinical Concept Extraction with Contextual Embeddings

338 citations · 757 across the 20 of their papers we have counts for

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Showing 2020Show all

7 papers · 1 filter

cs.LG2020★ 250 cited

Deep Representation Learning of Patient Data from Electronic Health Records (EHR): A Systematic Review

Yuqi Si, Jingcheng Du, Zhao Li +5

Patient representation learning refers to learning a dense mathematical representation of a patient that encodes meaningful information from Electronic Health Records (EHRs). This…

cs.CL2020

Leveraging Spatial Information in Radiology Reports for Ischemic Stroke Phenotyping

Surabhi Datta, Shekhar Khanpara, Roy F. Riascos +1

Classifying fine-grained ischemic stroke phenotypes relies on identifying important clinical information. Radiology reports provide relevant information with context to determine s…

cs.AI2020★ 1 cited

Extracting Concepts for Precision Oncology from the Biomedical Literature

Nicholas Greenspan, Yuqi Si, Kirk Roberts

This paper describes an initial dataset and automatic natural language processing (NLP) method for extracting concepts related to precision oncology from biomedical research articl…

cs.CL2020

RadLex Normalization in Radiology Reports

Surabhi Datta, Jordan Godfrey-Stovall, Kirk Roberts

Radiology reports have been widely used for extraction of various clinically significant information about patients' imaging studies. However, limited research has focused on stand…

cs.IR2020★ 2 cited

Patient Cohort Retrieval using Transformer Language Models

Sarvesh Soni, Kirk Roberts

We apply deep learning-based language models to the task of patient cohort retrieval (CR) with the aim to assess their efficacy. The task of CR requires the extraction of relevant…

cs.IR2020

An Evaluation of Two Commercial Deep Learning-Based Information Retrieval Systems for COVID-19 Literature

Sarvesh Soni, Kirk Roberts

The COVID-19 pandemic has resulted in a tremendous need for access to the latest scientific information, primarily through the use of text mining and search tools. This has led to…