activity
20162023
most citedEnhancing Clinical Concept Extraction with Contextual Embeddings

338 citations · 757 across the 20 of their papers we have counts for

collaborators

20 papers

cs.CL2023★ 8 cited

Evaluation of AI Chatbots for Patient-Specific EHR Questions

Alaleh Hamidi, Kirk Roberts

This paper investigates the use of artificial intelligence chatbots for patient-specific question answering (QA) from clinical notes using several large language model (LLM) based…

cs.CL2023★ 12 cited

Eye-SpatialNet: Spatial Information Extraction from Ophthalmology Notes

Surabhi Datta, Tasneem Kaochar, Hio Cheng Lam +5

We introduce an annotated corpus of 600 ophthalmology notes labeled with detailed spatial and contextual information of ophthalmic entities. We extend our previously proposed frame…

cs.DL2023★ 3 cited

Application of an ontology for model cards to generate computable artifacts for linking machine learning information from biomedical research

Muhammad Amith, Licong Cui, Kirk Roberts +1

Model card reports provide a transparent description of machine learning models which includes information about their evaluation, limitations, intended use, etc. Federal health ag…

cs.CL2022★ 1 cited

Toward a Neural Semantic Parsing System for EHR Question Answering

Sarvesh Soni, Kirk Roberts

Clinical semantic parsing (SP) is an important step toward identifying the exact information need (as a machine-understandable logical form) from a natural language query aimed at…

cs.AI2022★ 1 cited

DrugEHRQA: A Question Answering Dataset on Structured and Unstructured Electronic Health Records For Medicine Related Queries

Jayetri Bardhan, Anthony Colas, Kirk Roberts +1

This paper develops the first question answering dataset (DrugEHRQA) containing question-answer pairs from both structured tables and unstructured notes from a publicly available E…

cs.CL2021★ 63 cited

Deep learning-based NLP Data Pipeline for EHR Scanned Document Information Extraction

Enshuo Hsu, Ioannis Malagaris, Yong-Fang Kuo +2

Scanned documents in electronic health records (EHR) have been a challenge for decades, and are expected to stay in the foreseeable future. Current approaches for processing often…