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cs.DC2019
Efficient Architecture-Aware Acceleration of BWA-MEM for Multicore Systems
Vasimuddin Md, Sanchit Misra, Heng Li +1
Innovations in Next-Generation Sequencing are enabling generation of DNA sequence data at ever faster rates and at very low cost. Large sequencing centers typically employ hundreds…
cs.DC2016
LightScan: Faster Scan Primitive on CUDA Compatible Manycore Processors
Yongchao Liu, Srinivas Aluru
Scan (or prefix sum) is a fundamental and widely used primitive in parallel computing. In this paper, we present LightScan, a faster parallel scan primitive for CUDA-enabled GPUs,…