176 citations · 683 across the 36 of their papers we have counts for
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Smoothing in linear multicompartment biological processes subject to stochastic input
Alexander P Browning, Adrianne L Jenner, Ruth E Baker +1
Many physical and biological systems rely on the progression of material through multiple independent stages. In viral replication, for example, virions enter a cell to undergo a c…
A practical guide to pseudo-marginal methods for computational inference in systems biology
David J. Warne, Ruth E. Baker, Matthew J. Simpson
For many stochastic models of interest in systems biology, such as those describing biochemical reaction networks, exact quantification of parameter uncertainty through statistical…
Simulation and inference algorithms for stochastic biochemical reaction networks: from basic concepts to state-of-the-art
David J. Warne, Ruth E. Baker, Matthew J. Simpson
Stochasticity is a key characteristic of intracellular processes such as gene regulation and chemical signalling. Therefore, characterising stochastic effects in biochemical system…