144 citations · 260 across the 5 of their papers we have counts for
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Spatial modeling algorithms for reactions and transport (SMART) in biological cells
Emmet A. Francis, Justin G. Laughlin, Jørgen S. Dokken +4
Biological cells rely on precise spatiotemporal coordination of biochemical reactions to control their many functions. Such cell signaling networks have been a common focus for mat…
SMART: Spatial Modeling Algorithms for Reaction and Transport
Justin G. Laughlin, Jørgen S. Dokken, Henrik N. T. Finsberg +4
Recent advances in microscopy and 3D reconstruction methods have allowed for characterization of cellular morphology in unprecedented detail, including the irregular geometries of…
3D mesh processing using GAMer 2 to enable reaction-diffusion simulations in realistic cellular geometries
Christopher T. Lee, Justin G. Laughlin, Nils Angliviel de La Beaumelle +5
Recent advances in electron microscopy have enabled the imaging of single cells in 3D at nanometer length scale resolutions. An uncharted frontier for in silico biology is the abil…