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q-bio.GN2017
Ococo: an online variant and consensus caller
Karel Břinda, Valentina Boeva, Gregory Kucherov
Motivation: Identifying genomic variants is an essential step for connecting genotype and phenotype. The usual approach consists of statistical inference of variants from alignment…
q-bio.GN2016
Dynamic read mapping and online consensus calling for better variant detection
Karel Břinda, Valentina Boeva, Gregory Kucherov
Variant detection from high-throughput sequencing data is an essential step in identification of alleles involved in complex diseases and cancer. To deal with these massive data, e…