27 citations · 48 across the 15 of their papers we have counts for
15 papers
Predicting protein inter-residue contacts using composite likelihood maximization and deep learning
Haicang Zhang, Qi Zhang, Fusong Ju +7
Accurate prediction of inter-residue contacts of a protein is important to calcu- lating its tertiary structure. Analysis of co-evolutionary events among residues has been proved e…
Improving protein threading accuracy via combining local and global potential using TreeCRF model
Haicang Zhang, Mingfu Shao, Chao Wang +3
Protein structure prediction remains to be an open problem in bioinformatics. There are two main categories of methods for protein structure prediction: Free Modeling (FM) and Temp…
TOPO: Improving remote homologue recognition via identifying common protein structure framework
Jianwei Zhu, Haicang Zhang, Chao Wang +3
Protein structure prediction remains a challenge in the field of computational biology. Traditional protein structure prediction approaches include template-based modelling (say, h…
Optimizing weights of protein energy function to improve ab initio protein structure prediction
Chao Wang, Yi Wei, Juntao Liu +5
Predicting protein 3D structure from amino acid sequence remains as a challenge in the field of computational biology. If protein structure homologues are not found, one has to con…
Looking for packing units of the protein structure
Wei-Mou Zheng, Hui Zeng, Dong-Bo Bu +3
Lattice-model simulations and experiments of some small proteins suggest that folding is essentially controlled by a few conserved contacts. Residues of these conserved contacts fo…
CLePAPS: Fast Pair Alignment of Protein Structures Based on Conformational Letters
Sheng Wang, Wei-Mou Zheng
Fast, efficient and reliable algorithms for pairwise alignment of protein structures are in ever increasing demand for analyzing the rapidly growing data of protein structures. CLe…