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math.CO2016
Statistics of topological RNA structures
Thomas J. X. Li, Christian M. Reidys
In this paper we study properties of topological RNA structures, i.e.~RNA contact structures with cross-serial interactions that are filtered by their topological genus. RNA second…
math.CO2016
RNA secondary structures having a compatible sequence of certain nucleotide ratios
Christopher L. Barrett, Thomas J. X. Li, Christian M. Reidys
Given a random RNA secondary structure, , we study RNA sequences having fixed ratios of nuclotides that are compatible with . We perform this analysis for RNA secondary struc…