193 citations · 237 across the 3 of their papers we have counts for
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cond-mat.stat-mech2013
Uniform sampling of steady states in metabolic networks: heterogeneous scales and rounding
Daniele De Martino, Matteo Mori, Valerio Parisi
The uniform sampling of convex polytopes is an interesting computational problem with many applications in inference from linear constraints, but the performances of sampling algor…
q-bio.MN2013★ 41 cited
Counting and correcting thermodynamically infeasible flux cycles in genome-scale metabolic networks
Daniele De Martino, Fabrizio Capuani, Matteo Mori +2
Thermodynamics constrains the flow of matter in a reaction network to occur through routes along which the Gibbs energy decreases, implying that viable steady-state flux patterns s…