60 citations · 405 across the 30 of their papers we have counts for
3 papers · 1 filter
A scalable algorithm to explore the Gibbs energy landscape of genome-scale metabolic networks
Daniele De Martino, Matteo Figliuzzi, Andrea De Martino +1
The integration of various types of genomic data into predictive models of biological networks is one of the main challenges currently faced by computational biology. Constraint-ba…
Reaction networks as systems for resource allocation: A variational principle for their non-equilibrium steady states
Andrea De Martino, Daniele De Martino, Roberto Mulet +1
Within a fully microscopic setting, we derive a variational principle for the non-equilibrium steady states of chemical reaction networks, valid for time-scales over which chemical…
On the Clausius formulation of the second law in stationary chemical networks through the theorems of the alternative
Daniele De Martino
In this article the Gordan theorem is applied to the thermodynamics of a chemical reaction network at steady state. From a theoretical viewpoint it is equivalent to the Clausius fo…