5 papers
Ambiguous signals and efficient codes
Marianne Bauer, William Bialek
In many biological networks the responses of individual elements are ambiguous. We consider a scenario in which many sensors respond to a shared signal, each with limited informati…
Unifying Theories in High-Dimensional Biology: Approaches, Challenges and Opportunities
Marianne Bauer, Akshit Goyal, Sidhartha Goyal +19
Across biological subdisciplines, the last decade has seen an explosion of high-dimensional datasets, including datasets for cells, species, immune systems, neurons and behaviour.…
Weak transcription factor clustering at binding sites can facilitate information transfer from molecular signals
Tamara MijatoviÄ, Aimée R. Kok, Merlijn Brüggen +2
Transcription factor concentrations provide signals to cells that allow them to regulate gene expression to make correct cell fate decisions. Calculations for noise bounds in gene…
Terahertz frequency-domain 4x4 Mueller matrix ellipsometer instrument designed for high-frequency magnetic resonance measurements
Viktor Rindert, Alexander Ruder, Steffen Richter +4
We report a Mueller matrix ellipsometer design using dual continuously rotating anisotropic meta wave plates which determines the full set of Mueller matrix elements in the teraher…
Stroboscopic measurements in Markov networks: Exact generator reconstruction vs. thermodynamic inference
Malena T. Bauer, Udo Seifert, Jann van der Meer
A major goal of stochastic thermodynamics is to estimate the inevitable dissipation that accompanies particular observable phenomena in an otherwise not fully accessible system. Qu…