4 papers
Dynamics-inspired Structure Hallucination for Protein-protein Interaction Modeling
Fang Wu, Stan Z. Li
Protein-protein interaction (PPI) represents a central challenge within the biology field, and accurately predicting the consequences of mutations in this context is crucial for dr…
Instructor-inspired Machine Learning for Robust Molecular Property Prediction
Fang Wu, Shuting Jin, Siyuan Li +1
Machine learning catalyzes a revolution in chemical and biological science. However, its efficacy heavily depends on the availability of labeled data, and annotating biochemical da…
InsertGNN: Can Graph Neural Networks Outperform Humans in TOEFL Sentence Insertion Problem?
Fang Wu, Stan Z. Li
The integration of sentences poses an intriguing challenge within the realm of NLP, but it has not garnered the attention it deserves. Existing methods that focus on sentence arran…
Life-Code: Central Dogma Modeling with Multi-Omics Sequence Unification
Zicheng Liu, Siyuan Li, Zhiyuan Chen +6
The interactions between DNA, RNA, and proteins are fundamental to biological processes, as illustrated by the central dogma of molecular biology. Although modern biological pre-tr…