367 citations · 409 across the 4 of their papers we have counts for
4 papers
Prediction of transcription factor binding to DNA using rule induction methods
Mikael Huss, Karin Nordstrom
The transcription of DNA into mRNA is initiated and aided by a number of transcription factors (TFs), proteins with DNA-binding regions that attach themselves to binding sites in t…
Role-similarity based functional prediction in networked systems: Application to the yeast proteome
Petter Holme, Mikael Huss
We propose a general method to predict functions of vertices where: 1. The wiring of the network is somehow related to the vertex functionality. 2. A fraction of the vertices are f…
Discovery and analysis of biochemical subnetwork hierarchies
Petter Holme, Mikael Huss
The representation of a biochemical network as a graph is the coarsest level of description in cellular biochemistry. By studying the network structure one can draw conclusions on…
Subnetwork hierarchies of biochemical pathways
Petter Holme, Mikael Huss, Hawoong Jeong
We present a method to decompose biochemical networks into subnetworks based on the global geometry of the network. This method enables us to analyse the full hierarchical organisa…