activity
20002022
most citedWhat drives amyloid molecules to assemble into oligomers and fibrils?

143 citations · 740 across the 26 of their papers we have counts for

collaborators

26 papers

cond-mat.stat-mech2022★ 3 cited

Non-Equilibrium Statistical Physics Beyond the Ideal Heat Bath Approximation

Jonathan Asher Pachter, Ken A. Dill

Important models of nonequilibrium statistical physics (NESP) are limited by a commonly used, but often unrecognized, near-equilibrium approximation. Fokker-Planck and Langevin equ…

q-bio.NC2020

The refractory period matters: unifying mechanisms of macroscopic brain waves

Corey Weistuch, Lilianne R. Mujica-Parodi, Ken Dill

The relationship between complex, brain oscillations and the dynamics of individual neurons is poorly understood. Here we utilize Maximum Caliber, a dynamical inference principle,…

physics.bio-ph2020★ 10 cited

Inferring a network from dynamical signals at its nodes

Corey Weistuch, Luca Agozzino, Lilianne R. Mujica-Parodi +1

We give an approximate solution to the difficult inverse problem of inferring the topology of an unknown network from given time-dependent signals at the nodes. For example, we mea…

cond-mat.stat-mech2019★ 6 cited

Minimal constraints for Maximum Caliber analysis of dissipative steady state systems

Luca Agozzino, Ken A Dill

Maximum Caliber (Max Cal) is purported to be a general variational principle for Non-Equilibrium Statistical Physics (NESP). But recently, Jack and Evans and Maes have raised conce…

cond-mat.stat-mech2017★ 86 cited

Maximum Caliber: a general variational principle for dynamical systems

Purushottam D. Dixit, Jason Wagoner, Corey Weistuch +3

We review here {\it Maximum Caliber} (Max Cal), a general variational principle for inferring distributions of paths in dynamical processes and networks. Max Cal is to dynamical tr…

cond-mat.stat-mech2017★ 1 cited

Caliber Corrected Markov Modeling (C2M2): Correcting Equilibrium Markov models

Purushottam D. Dixit, Ken A. Dill

Rate processes are often modeled using Markov-State Models (MSM). Suppose you know a prior MSM, and then learn that your prediction of some particular observable rate is wrong. Wha…