20 citations · 33 across the 16 of their papers we have counts for
3 papers · 1 filter
Joint Inference of Genome Structure and Content in Heterogeneous Tumour Samples
Andrew McPherson, Andrew Roth, Gavin Ha +3
For a genomically unstable cancer, a single tumour biopsy will often contain a mixture of competing tumour clones. These tumour clones frequently differ with respect to their genom…
The genome of the medieval Black Death agent (extended abstract)
Ashok Rajaraman, Eric Tannier, Cedric Chauve
The genome of a 650 year old Yersinia pestis bacteria, responsible for the medieval Black Death, was recently sequenced and assembled into 2,105 contigs from the main chromosome. A…
Minimal Conflicting Sets for the Consecutive Ones Property in ancestral genome reconstruction
Cedric Chauve, Utz-Uwe Haus, Tamon Stephen +1
A binary matrix has the Consecutive Ones Property (C1P) if its columns can be ordered in such a way that all 1's on each row are consecutive. A Minimal Conflicting Set is a set of…