461 citations · 745 across the 22 of their papers we have counts for
4 papers · 1 filter
Variance reduction for antithetic integral control of stochastic reaction networks
Corentin Briat, Ankit Gupta, Mustafa Khammash
The antithetic integral feedback motif recently introduced in Briat, Gupta & Khammash (Cell Systems, 2017) is known to ensure robust perfect adaptation for the mean dynamics of a g…
Dynamic disorder in simple enzymatic reactions induces stochastic amplification of substrate
Ankit Gupta, Andreas Milias-Argeitis, Mustafa Khammash
A growing amount of evidence points to the fact that many enzymes exhibit fluctuations in their catalytic activity, which are associated with conformational changes on a broad rang…
A finite state projection algorithm for the stationary solution of the chemical master equation
Ankit Gupta, Jan Mikelson, Mustafa Khammash
The chemical master equation (CME) is frequently used in systems biology to quantify the effects of stochastic fluctuations that arise due to biomolecular species with low copy num…
Estimation of parameter sensitivities for stochastic reaction networks using tau-leap simulations
Ankit Gupta, Muruhan Rathinam, Mustafa Khammash
We consider the important problem of estimating parameter sensitivities for stochastic models of reaction networks that describe the dynamics as a continuous-time Markov process ov…