148 citations · 747 across the 25 of their papers we have counts for
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physics.bio-ph2012★ 65 cited
Facilitated diffusion on mobile DNA: configurational traps and sequence heterogeneity
C. A. Brackley, M. E. Cates, D. Marenduzzo
We present Brownian dynamics simulations of the facilitated diffusion of a protein, modelled as a sphere with a binding site on its surface, along DNA, modelled as a semi-flexible…
cond-mat.stat-mech2012★ 32 cited
Multiple phase transitions in a system of exclusion processes with limited reservoirs of particles and fuel carriers
Chris A. Brackley, Luca Ciandrini, M. Carmen Romano
The TASEP is a paradigmatic model from non-equilibrium statistical physics, which describes particles hopping along a lattice of discrete sites. The TASEP is applicable to a broad…