2.7k citations · 3.5k across the 7 of their papers we have counts for
4 papers · 1 filter
bia-binder: A web-native cloud compute service for the bioimage analysis community
Craig T. Russell, Jean-Marie Burel, Awais Athar +6
We introduce bia-binder (BioImage Archive Binder), an open-source, cloud-architectured, and web-based coding environment tailored to bioimage analysis that is freely accessible to…
Putative cell type discovery from single-cell gene expression data
Zhichao Miao, Pablo Moreno, Ni Huang +3
We present a novel method for automated identification of putative cell types from single-cell RNA-seq (scRNA-seq) data. By iteratively applying a machine learning approach to an i…
Public archives for biological image data
Jan Ellenberg, Jason R Swedlow, Mary Barlow +4
Public data archives are the backbone of modern biological and biomedical research. While archives for biological molecules and structures are well-established, resources for imagi…
Fully scalable online-preprocessing algorithm for short oligonucleotide microarray atlases
Leo Lahti, Aurora Torrente, Laura L. Elo +2
Accumulation of standardized data collections is opening up novel opportunities for holistic characterization of genome function. The limited scalability of current preprocessing t…