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20132021
most citedAttend and Predict: Understanding Gene Regulation by Selective Attention on Chromatin

59 citations · 115 across the 9 of their papers we have counts for

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cs.LG20213 cited

Towards Automatic Actor-Critic Solutions to Continuous Control

Jake Grigsby, Jin Yong Yoo, Yanjun Qi

Model-free off-policy actor-critic methods are an efficient solution to complex continuous control tasks. However, these algorithms rely on a number of design tricks and hyperparam…

cs.LG20195 cited

Neural Message Passing for Multi-Label Classification

Jack Lanchantin, Arshdeep Sekhon, Yanjun Qi

Multi-label classification (MLC) is the task of assigning a set of target labels for a given sample. Modeling the combinatorial label interactions in MLC has been a long-haul chall…

cs.LG2018

DeepDiff: Deep-learning for predicting Differential gene expression from histone modifications

Arshdeep Sekhon, Ritambhara Singh, Yanjun Qi

Computational methods that predict differential gene expression from histone modification signals are highly desirable for understanding how histone modifications control the funct…

cs.LG2018

A Fast and Scalable Joint Estimator for Integrating Additional Knowledge in Learning Multiple Related Sparse Gaussian Graphical Models

Beilun Wang, Arshdeep Sekhon, Yanjun Qi

We consider the problem of including additional knowledge in estimating sparse Gaussian graphical models (sGGMs) from aggregated samples, arising often in bioinformatics and neuroi…

cs.LG2017

Prototype Matching Networks for Large-Scale Multi-label Genomic Sequence Classification

Jack Lanchantin, Arshdeep Sekhon, Ritambhara Singh +1

One of the fundamental tasks in understanding genomics is the problem of predicting Transcription Factor Binding Sites (TFBSs). With more than hundreds of Transcription Factors (TF…

cs.LG201759 cited

Attend and Predict: Understanding Gene Regulation by Selective Attention on Chromatin

Ritambhara Singh, Jack Lanchantin, Arshdeep Sekhon +1

The past decade has seen a revolution in genomic technologies that enable a flood of genome-wide profiling of chromatin marks. Recent literature tried to understand gene regulation…