40 citations · 182 across the 16 of their papers we have counts for
4 papers · 1 filter
PyTorch Connectomics: A Scalable and Flexible Segmentation Framework for EM Connectomics
Zudi Lin, Donglai Wei, Jeff Lichtman +1
We present PyTorch Connectomics (PyTC), an open-source deep-learning framework for the semantic and instance segmentation of volumetric microscopy images, built upon PyTorch. We de…
NucMM Dataset: 3D Neuronal Nuclei Instance Segmentation at Sub-Cubic Millimeter Scale
Zudi Lin, Donglai Wei, Mariela D. Petkova +12
Segmenting 3D cell nuclei from microscopy image volumes is critical for biological and clinical analysis, enabling the study of cellular expression patterns and cell lineages. Howe…
VICE: Visual Identification and Correction of Neural Circuit Errors
Felix Gonda, Xueying Wang, Johanna Beyer +3
A connectivity graph of neurons at the resolution of single synapses provides scientists with a tool for understanding the nervous system in health and disease. Recent advances in…
Learning Guided Electron Microscopy with Active Acquisition
Lu Mi, Hao Wang, Yaron Meirovitch +5
Single-beam scanning electron microscopes (SEM) are widely used to acquire massive data sets for biomedical study, material analysis, and fabrication inspection. Datasets are typic…