58 citations · 103 across the 4 of their papers we have counts for
4 papers
Strongly bent double-stranded DNA: reconciling theory and experiment
Aleksander V. Drozdetski, Abhishek Mukhopadhyay, Alexey V. Onufriev
The strong bending of polymers is poorly understood. We propose a general quantitative framework of polymer bending that includes both the weak and strong bending regimes on the sa…
Accurate Evaluation of Charge Asymmetry in Aqueous Solvation
Abhishek Mukhopadhyay, Igor S. Tolokh, Alexey V. Onufriev
Charge hydration asymmetry (CHA)--a characteristic dependence of hydration free energy on the sign of the solute charge--quantifies the asymmetric response of water to electric fie…
Statistical Mechanics Model for the Dynamics of Collective Epigenetic Histone Modification
Hang Zhang, Xiao-Jun Tian, Abhishek Mukhopadhyay +2
Epigenetic histone modifications play an important role in the maintenance of different cell phenotypes. The exact molecular mechanism for inheritance of the modification patterns…
A numerical procedure for model reduction using the generalized Langevin equation formalism
Abhishek Mukhopadhyay, Jianhua Xing
The Zwanzig-Mori pro jection formalism is widely used in studying systems with many degrees of freedom. Recently Xing and Kim used the pro jection formalism and derived the general…