3 papers
cs.CL2021
Automatic Extraction of Medication Names in Tweets as Named Entity Recognition
Carol Anderson, Bo Liu, Anas Abidin +2
Social media posts contain potentially valuable information about medical conditions and health-related behavior. Biocreative VII Task 3 focuses on mining this information by recog…
cs.CL2021
Chemical Identification and Indexing in PubMed Articles via BERT and Text-to-Text Approaches
Virginia Adams, Hoo-Chang Shin, Carol Anderson +2
The Biocreative VII Track-2 challenge consists of named entity recognition, entity-linking (or entity-normalization), and topic indexing tasks -- with entities and topics limited t…
cs.CL2021
Text Mining Drug/Chemical-Protein Interactions using an Ensemble of BERT and T5 Based Models
Virginia Adams, Hoo-Chang Shin, Carol Anderson +2
In Track-1 of the BioCreative VII Challenge participants are asked to identify interactions between drugs/chemicals and proteins. In-context named entity annotations for each drug/…