1.2k citations · 1.2k across the 2 of their papers we have counts for
3 papers
Analysing high-throughput sequencing data in Python with HTSeq 2.0
Givanna H Putri, Simon Anders, Paul Theodor Pyl +2
Summary: HTSeq 2.0 provides a more extensive API including a new representation for sparse genomic data, enhancements in htseq-count to suit single cell omics, a new script for dat…
BADER: Bayesian analysis of differential expression in RNA sequencing data
Matthias Katzfuss, Andreas Neudecker, Simon Anders +1
Identifying differentially expressed genes from RNA sequencing data remains a challenging task because of the considerable uncertainties in parameter estimation and the small sampl…
Count-based differential expression analysis of RNA sequencing data using R and Bioconductor
Simon Anders, Davis J. McCarthy, Yunshen Chen +4
RNA sequencing (RNA-seq) has been rapidly adopted for the profiling of transcriptomes in many areas of biology, including studies into gene regulation, development and disease. Of…