20 citations · 37 across the 3 of their papers we have counts for
3 papers
Algorithm engineering for optimal alignment of protein structure distance matrices
Inken Wohlers, Rumen Andonov, Gunnar W. Klau
Protein structural alignment is an important problem in computational biology. In this paper, we present first successes on provably optimal pairwise alignment of protein inter-res…
An Exact Algorithm for Side-Chain Placement in Protein Design
Stefan Canzar, Nora C. Toussaint, Gunnar W. Klau
Computational protein design aims at constructing novel or improved functions on the structure of a given protein backbone and has important applications in the pharmaceutical and…
Antilope - A Lagrangian Relaxation Approach to the de novo Peptide Sequencing Problem
Sandro Andreotti, Gunnar W. Klau, Knut Reinert
Peptide sequencing from mass spectrometry data is a key step in proteome research. Especially de novo sequencing, the identification of a peptide from its spectrum alone, is still…