373 citations · 422 across the 24 of their papers we have counts for
7 papers · 1 filter
Dimensions of Level-1 Group-Based Phylogenetic Networks
Elizabeth Gross, Robert Krone, Samuel Martin
Phylogenetic networks represent evolutionary histories of sets of taxa where horizontal evolution or hybridization has occurred. Placing a Markov model of evolution on a phylogenet…
Statistical learning with phylogenetic network invariants
Travis Barton, Elizabeth Gross, Colby Long +1
Phylogenetic networks provide a means of describing the evolutionary history of sets of species believed to have undergone hybridization or gene flow during their evolution. The mu…
Distinguishing level-1 phylogenetic networks on the basis of data generated by Markov processes
Elizabeth Gross, Leo van Iersel, Remie Janssen +3
Phylogenetic networks can represent evolutionary events that cannot be described by phylogenetic trees. These networks are able to incorporate reticulate evolutionary events such a…
Phylogenetic Networks
Elizabeth Gross, Colby Long, Joseph Rusinko
Phylogenetics is the study of the evolutionary relationships between organisms. One of the main challenges in the field is to take biological data for a group of organisms and to i…
Dimensions of Group-based Phylogenetic Mixtures
Hector Baños, Nathaniel Bushek, Ruth Davidson +6
In this paper we study group-based Markov models of evolution and their mixtures. In the algebreo-geometric setting, group-based phylogenetic tree models correspond to toric variet…
Distinguishing Phylogenetic Networks
Elizabeth Gross, Colby Long
Phylogenetic networks are becoming increasingly popular in phylogenetics since they have the ability to describe a wider range of evolutionary events than their tree counterparts.…
Phylogenetic trees
Hector Baños, Nathaniel Bushek, Ruth Davidson +6
We introduce the package PhylogeneticTrees for Macaulay2 which allows users to compute phylogenetic invariants for group-based tree models. We provide some background information o…