239 citations · 280 across the 15 of their papers we have counts for
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q-bio.PE2023★ 1 cited
Bayesian mixture models for phylogenetic source attribution from consensus sequences and time since infection estimates
Alexandra Blenkinsop, Lysandros Sofocleous, Francesco Di Lauro +8
In stopping the spread of infectious diseases, pathogen genomic data can be used to reconstruct transmission events and characterize population-level sources of infection. Most app…
stat.ME2023
Inferring HIV Transmission Patterns from Viral Deep-Sequence Data via Latent Typed Point Processes
Fan Bu, Joseph Kagaayi, Kate Grabowski +2
Viral deep-sequencing data play a crucial role toward understanding disease transmission network flows, because the higher resolution of these data compared to standard Sanger sequ…