308 citations · 698 across the 14 of their papers we have counts for
Showing 2014 · cs.DSShow all
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cs.DS2014★ 308 cited
KMC 2: Fast and resource-frugal -mer counting
Sebastian Deorowicz, Marek Kokot, Szymon Grabowski +1
Motivation: Building the histogram of occurrences of every -symbol long substring of nucleotide data is a standard step in many bioinformatics applications, known under the name…
cs.DS2014
Disk-based genome sequencing data compression
Szymon Grabowski, Sebastian Deorowicz, Łukasz Roguski
Motivation: High-coverage sequencing data have significant, yet hard to exploit, redundancy. Most FASTQ compressors cannot efficiently compress the DNA stream of large datasets, si…