124 citations · 971 across the 28 of their papers we have counts for
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Local Interactions and Protein Folding: A 3D Off-Lattice Approach
Anders Irbäck, Carsten Peterson, Frank Potthast +1
The thermodynamic behavior of a three-dimensional off-lattice model for protein folding is probed. The model has only two types of residues, hydrophobic and hydrophilic. In absence…
Identification of Amino Acid Sequences with Good Folding Properties in an Off-Lattice Model
Anders Irbäck, Carsten Peterson, Frank Potthast
Folding properties of a two-dimensional toy protein model containing only two amino-acid types, hydrophobic and hydrophilic, respectively, are analyzed. An efficient Monte Carlo pr…
Comment on `Avalanche Dynamics in Evolution, Growth and Depinning Models'
Mats Dahlbom, Anders Irbäck
This paper is withdrawn.
Binary Assignments of Amino Acids from Pattern Conservation
Anders Irbäck, Frank Potthast
We develop a simple optimization procedure for assigning binary values to the amino acids. The binary values are determined by a maximization of the degree of pattern conservation…